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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42048130_42048795_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42048130 - 42048795

Intron Length:

666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

TGTTTCCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

CGTCCCTTCATC

Flanking Amino Acid:

VAAPQVQQVPVLVQPQIIKT

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

69.1

35.7

Major BPS

0.62

1.1

77.2

Major PPT

74.5

0.55

0.9

66.7

39.7

Minor 5ss

35.2

-1.7

3.2

47.2

42.3

Minor BPS

56.2

0.18

1.8

64.34

41.5

Associated Gene:

Gene:

SREBF2

Ensembl Gene ID:

ENSAPLG00000003145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003287

42045309 - 42063116

17808