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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42052254_42052455_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42052254 - 42052455

Intron Length:

202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

CTGATTCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

ATGTGCATAATG

Flanking Amino Acid:

MVLKLANQKNKLLKGIDLSS

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

72.9

39.3

Major BPS

0.72

38.9

Major PPT

79.2

0.66

0.9

73.1

37.2

Minor 5ss

44.1

-0.6

2.9

63.9

41.5

Minor BPS

48.8

-0.2

2.1

58.47

43.6

Associated Gene:

Gene:

SREBF2

Ensembl Gene ID:

ENSAPLG00000003145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003287

42045309 - 42063116

17808