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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42052638_42053483_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42052638 - 42053483

Intron Length:

846

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTGTG

5'SS Class:

major

3'SS Sequence:

AAATTCTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

CTTGCTACAACA

Flanking Amino Acid:

PGSPLLDDAKVKDEPDSPPV

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

69.2

41.7

Major BPS

60.7

0.27

65.3

28.1

Major PPT

62.5

0.28

1.1

61.7

39.1

Minor 5ss

35.3

-1.7

3.5

49.3

46.9

Minor BPS

48.5

-0.1

1.9

64.11

42.5

Associated Gene:

Gene:

SREBF2

Ensembl Gene ID:

ENSAPLG00000003145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003287

42045309 - 42063116

17808