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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42053677_42054301_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42053677 - 42054301

Intron Length:

625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGAGT

5'SS Class:

major

3'SS Sequence:

ATGCCCGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

AACTTCTCACTC

Flanking Amino Acid:

SGRSVLTIESDAGGWFGWMM

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.2

73.4

43.3

Major BPS

0.87

0.8

85.6

Major PPT

69.6

0.44

39.2

Minor 5ss

39.5

-1.2

3.2

57.9

46.4

Minor BPS

46.8

-0.2

1.7

53.38

38.8

Associated Gene:

Gene:

SREBF2

Ensembl Gene ID:

ENSAPLG00000003145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003287

42045309 - 42063116

17808