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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42054484_42055044_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

42054484 - 42055044

Intron Length:

561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGAGCTG

5'SS Class:

weak_major

3'SS Sequence:

GTGATGTTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TTTTTGTGACTT

Flanking Amino Acid:

RKQADLDLARGDFAAAASNL

Intron Amino Acid Position:

565

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.5

0.22

1.2

48.5

47.4

Major BPS

78.6

0.71

79.6

32.9

Major PPT

68.2

0.41

61.2

44.4

Minor 5ss

31.9

-2.1

3.7

37.6

47.2

Minor BPS

47.7

-0.1

2.3

75.82

41.6

Associated Gene:

Gene:

SREBF2

Ensembl Gene ID:

ENSAPLG00000003145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003287

42045309 - 42063116

17808