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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42055319_42056184_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42055319 - 42056184

Intron Length:

866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACCAT

U12 Branch Point Sequence:

CTTGGGTTAACC

Flanking Amino Acid:

YHKLHQLHITGKLPSSSAYS

Intron Amino Acid Position:

656

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

73.2

34.8

Major BPS

57.8

0.19

1.3

67.1

39.2

Major PPT

0.61

72.4

37.7

Minor 5ss

30.5

-2.2

3.8

47.1

48.5

Minor BPS

47.6

-0.2

2.5

65.55

46.5

Associated Gene:

Gene:

SREBF2

Ensembl Gene ID:

ENSAPLG00000003145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003287

42045309 - 42063116

17808