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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42056688_42056964_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42056688 - 42056964

Intron Length:

277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAGCC

5'SS Class:

major

3'SS Sequence:

TCTTTCTCTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAGAA

U12 Branch Point Sequence:

CAGATAAGAACA

Flanking Amino Acid:

ESLYCTQRNPADPIAQVHQA

Intron Amino Acid Position:

769

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

0.9

64.8

33.2

Major BPS

49.7

-0

47.1

36.1

Major PPT

85.3

0.79

0.6

81.4

23.6

Minor 5ss

26.4

-2.7

3.2

36.4

Minor BPS

39.3

-0.8

1.8

44.23

37.2

Associated Gene:

Gene:

SREBF2

Ensembl Gene ID:

ENSAPLG00000003145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003287

42045309 - 42063116

17808