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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42059420_42060116_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42059420 - 42060116

Intron Length:

697

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGCGTAGG

5'SS Class:

major

3'SS Sequence:

CTTTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CCGCTCGGAAGC

Flanking Amino Acid:

ERVPKSLEMSENALVKATFH

Intron Amino Acid Position:

890

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.26

1.1

53.6

45.2

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

88.6

0.87

0.7

80.8

31.2

Minor 5ss

29.9

-2.3

2.8

29.1

Minor BPS

-1

2.1

39.21

40.2

Associated Gene:

Gene:

SREBF2

Ensembl Gene ID:

ENSAPLG00000003145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003287

42045309 - 42063116

17808