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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42107602_42108832_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42107602 - 42108832

Intron Length:

1231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCCTGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TCTTCCCAACCC

Flanking Amino Acid:

EFALLRDFVIRTHLQDLKEV

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

Major BPS

0.62

1.1

77.2

Major PPT

68.1

0.41

1.1

65.5

Minor 5ss

-2.2

3.2

39.6

45.9

Minor BPS

47.8

-0.1

2.2

66.79

Associated Gene:

Gene:

SEPTIN3

Ensembl Gene ID:

ENSAPLG00000002801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002847

42100272 - 42108968

8697