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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42123607_42124000_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

42123607 - 42124000

Intron Length:

394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCGACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

TTTCCTCCGACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

68.5

38.7

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

68.8

0.42

62.7

38.4

Minor 5ss

30.3

-2.3

3.3

46.8

Minor BPS

49.1

-0

1.9

68.63

36.7

Associated Gene:

Gene:

PHETA2

Ensembl Gene ID:

ENSAPLG00000028764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036899

42123339 - 42127608

4270