Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_42133968_42134090_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42133968 - 42134090

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGGGGG

5'SS Class:

major

3'SS Sequence:

GGTGTGCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTGAT

U12 Branch Point Sequence:

GGGGCCGTGATC

Flanking Amino Acid:

RAWYREVPNTVHLYQLDITV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

54.8

44.4

Major BPS

56.3

0.16

1.3

48.7

45.1

Major PPT

62.9

0.29

54.5

41.4

Minor 5ss

22.7

-3.1

3.2

37.8

Minor BPS

44.6

-0.4

2.1

50.44

Associated Gene:

Gene:

NDUFA6

Ensembl Gene ID:

ENSAPLG00000006912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007169

42132983 - 42134211

1229