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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42136111_42137041_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

42136111 - 42137041

Intron Length:

931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCACG

5'SS Class:

strong_major

3'SS Sequence:

TGGAGGAGTGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TCTCACGTAAGT

Flanking Amino Acid:

TELQGYFIPKGTTVITNLSS

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.4

40.3

Major BPS

0.87

0.8

85.6

Major PPT

52.4

0.05

1.2

43.4

46.4

Minor 5ss

34.3

-1.8

2.8

40.4

45.5

Minor BPS

46.3

-0.2

2.4

70.09

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006330

42135400 - 42142641

7242