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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42138060_42139417_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42138060 - 42139417

Intron Length:

1358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATCAC

U12 Branch Point Sequence:

TTGCTCCTATCA

Flanking Amino Acid:

TDAFLKEMSKGKEAEENGFN

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.6

42.7

Major BPS

0.4

1.1

69.4

35.8

Major PPT

78.2

0.63

0.8

73.3

31.6

Minor 5ss

30.2

-2.3

3.3

39.5

46.1

Minor BPS

48.8

-0

1.9

65.14

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006330

42135400 - 42142641

7242