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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42141043_42142440_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42141043 - 42142440

Intron Length:

1398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTATCTTGCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATCT

Flanking Amino Acid:

FNNPHLSFNKFHKKFGNIFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.1

0.66

73.5

41.7

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

74.5

0.85

1.5

91.05

32.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006330

42135400 - 42142641

7242