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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42172217_42193569_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42172217 - 42193569

Intron Length:

21353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

ACAGTCTTCATT

Flanking Amino Acid:

QEAVEIAREMKCSHCQEPGA

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.7

31.8

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

84.9

0.78

0.8

81.6

30.4

Minor 5ss

31.7

-2.1

2.6

35.1

34.5

Minor BPS

48.2

-0

1.8

61.91

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021761

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021479

42171839 - 42194163

22325