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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42282373_42286439_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42282373 - 42286439

Intron Length:

4067

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

CTTCCCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTTTTTCTAACC

Flanking Amino Acid:

SPPPPSPVYDCLNSQQVEVY

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

74.9

35.3

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

85.8

0.8

0.7

80.2

Minor 5ss

32.9

-1.9

2.6

37.5

32.2

Minor BPS

70.1

0.61

1.6

82.44

30.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028139

42279826 - 42292255

12430