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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42286539_42288898_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42286539 - 42288898

Intron Length:

2360

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCCTGAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCAAAT

U12 Branch Point Sequence:

TTTTCTCCAAAT

Flanking Amino Acid:

ATALLVWKRKVLCPKRNQLN

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.7

30.2

Major BPS

64.7

0.37

1.1

69.5

34.1

Major PPT

69.8

0.45

66.7

39.3

Minor 5ss

31.5

-2.1

48.7

47.5

Minor BPS

56.2

0.27

82.57

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028139

42279826 - 42292255

12430