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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42310981_42314027_R

Intron Information:

Intron Rank:

148613

Intron Class:

major

Intron Phase:

Intron Coordinates:

42310981 - 42314027

Intron Length:

3047

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

TTGGCCTCACTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

71.4

40.3

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

81.6

0.71

0.7

77.1

24.9

Minor 5ss

35.1

-1.7

3.1

48.4

47.3

Minor BPS

48.8

-0.1

1.9

61.97

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046499

42309454 - 42322369

12916