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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42333469_42333612_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

42333469 - 42333612

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGTGCT

5'SS Class:

major

3'SS Sequence:

TTACGCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

AGTTACTAAAGA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

71.7

38.2

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

80.4

0.68

0.9

77.2

36.8

Minor 5ss

34.4

-1.8

3.4

47.2

43.5

Minor BPS

48.5

-0.1

2.1

63.53

42.5

Associated Gene:

Gene:

SERHL2

Ensembl Gene ID:

ENSAPLG00000005552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005767

42333213 - 42339321

6109