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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42334753_42335420_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42334753 - 42335420

Intron Length:

668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

CTGCTTATAACT

Flanking Amino Acid:

RRFTLMGHSMGGAVAGMFSF

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

71.1

40.4

Major BPS

77.9

0.69

78.3

31.3

Major PPT

86.2

0.81

0.8

80.4

31.5

Minor 5ss

32.6

-2

3.1

35.3

41.4

Minor BPS

52.8

0.17

1.6

69.44

41.8

Associated Gene:

Gene:

SERHL2

Ensembl Gene ID:

ENSAPLG00000005552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005767

42333213 - 42339321

6109