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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42347797_42348188_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42347797 - 42348188

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

TTAAATCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTGCTTTTAAAT

Flanking Amino Acid:

NVITSDQPILLRLSDTPSVK

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

36.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

73.9

0.54

0.9

66.8

39.9

Minor 5ss

40.2

-1.1

3.4

62.5

42.2

Minor BPS

58.2

0.34

1.4

69.73

41.5

Associated Gene:

Gene:

POLDIP3

Ensembl Gene ID:

ENSAPLG00000005154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005365

42347622 - 42358291

10670