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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42348256_42348968_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42348256 - 42348968

Intron Length:

713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTGTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

GATTCTGAGATA

Flanking Amino Acid:

YKKYNNRCLDGQPMKCNLHM

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

80.5

34.9

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

81.1

0.7

0.9

81.2

36.5

Minor 5ss

-0.7

2.8

55.1

43.4

Minor BPS

43.4

-0.5

2.2

54.94

38.4

Associated Gene:

Gene:

POLDIP3

Ensembl Gene ID:

ENSAPLG00000005154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005365

42347622 - 42358291

10670