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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42350847_42352053_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42350847 - 42352053

Intron Length:

1207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

TCGCCTGCAGCT

Flanking Amino Acid:

TTTNSFLHNATGLSGNKFSL

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

73.4

37.5

Major BPS

58.6

0.22

1.5

38.9

Major PPT

81.3

0.7

77.1

24.9

Minor 5ss

31.4

-2.1

3.7

47.1

48.3

Minor BPS

40.4

-0.6

2.2

57.1

45.7

Associated Gene:

Gene:

POLDIP3

Ensembl Gene ID:

ENSAPLG00000005154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005365

42347622 - 42358291

10670