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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42354685_42356557_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42354685 - 42356557

Intron Length:

1873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTCAA

5'SS Class:

major

3'SS Sequence:

CCTCTAACTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

TTCCCTCTAACT

Flanking Amino Acid:

PAVKITKTIQQKAPVPGHSH

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.1

67.9

39.2

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

69.5

0.44

0.8

63.2

31.7

Minor 5ss

33.8

-1.8

3.2

40.4

Minor BPS

64.6

0.54

1.7

82.08

39.3

Associated Gene:

Gene:

POLDIP3

Ensembl Gene ID:

ENSAPLG00000005154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005365

42347622 - 42358291

10670