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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42390099_42390437_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42390099 - 42390437

Intron Length:

339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAACCA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTGATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CTTTCCTGAACT

Flanking Amino Acid:

RQFMRLAAKEAGLISDMISE

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

67.7

37.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

73.5

0.53

0.9

70.4

Minor 5ss

31.6

-2.1

3.1

40.3

45.3

Minor BPS

81.2

1.06

1.3

93.08

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005288

42387228 - 42392510

5283