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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42421445_42423179_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42421445 - 42423179

Intron Length:

1735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGATC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGAAT

U12 Branch Point Sequence:

AGTGTCTGAATT

Flanking Amino Acid:

REREEREKLRRSRSRDRRRH

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

35.1

Major BPS

0.3

1.4

71.9

Major PPT

82.1

0.72

0.8

80.8

31.3

Minor 5ss

35.4

-1.7

3.5

50.7

46.2

Minor BPS

57.4

0.31

1.5

71.56

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023311

42416308 - 42441540

25233