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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42423272_42425487_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42423272 - 42425487

Intron Length:

2216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAATCAT

5'SS Class:

major

3'SS Sequence:

CATTTTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TGTAACTTAATG

Flanking Amino Acid:

EIREKLEELRRIVADKQEKR

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

71.2

40.6

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

83.1

0.74

0.7

81.5

30.1

Minor 5ss

34.8

-1.7

3.1

41.4

45.1

Minor BPS

62.5

0.25

1.6

66.31

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023311

42416308 - 42441540

25233

ENSAPLT00000004749

42415453 - 42439044

23592