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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42425665_42426744_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42425665 - 42426744

Intron Length:

1080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

GACTAATAAATT

Flanking Amino Acid:

KARVKKREAEEVYRNSMPAS

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

77.8

33.2

Major BPS

70.8

0.52

70.6

31.6

Major PPT

0.65

0.8

37.3

Minor 5ss

41.3

-1

2.8

49.5

41.2

Minor BPS

44.9

-0.3

60.1

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023311

42416308 - 42441540

25233

ENSAPLT00000004749

42415453 - 42439044

23592