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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42427624_42428496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42427624 - 42428496

Intron Length:

873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTATGTATC

5'SS Class:

major

3'SS Sequence:

GTTGATGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTCTTGTTGATG

Flanking Amino Acid:

KDQDFFFELDAMDHLQSFIA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

32.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

0.54

69.4

45.7

Minor 5ss

48.8

-0.1

2.5

67.5

36.5

Minor BPS

49.7

-0.1

2.1

61.1

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023311

42416308 - 42441540

25233

ENSAPLT00000004749

42415453 - 42439044

23592