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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42428596_42438949_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

42428596 - 42438949

Intron Length:

10354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTACGTAGC

5'SS Class:

major

3'SS Sequence:

TGTCTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTACATTACTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.2

60.6

44.2

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.83

0.7

84.7

30.2

Minor 5ss

37.9

-1.4

42.4

Minor BPS

59.2

0.37

1.9

81.97

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023311

42416308 - 42441540

25233

ENSAPLT00000004749

42415453 - 42439044

23592