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Intron Name: Anas_platyrhynchos_platyrhynchos_1_424350_424706_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

424350 - 424706

Intron Length:

357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TTGTCCTTATTT

Flanking Amino Acid:

ETNRRNTVDLVSTHHLHSSS

Intron Amino Acid Position:

533

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

0.9

72.2

32.1

Major BPS

78.8

0.72

67.9

40.1

Major PPT

93.7

0.98

0.6

92.5

17.4

Minor 5ss

28.5

-2.5

2.7

29.8

36.4

Minor BPS

74.8

0.86

1.5

87.69

38.3

Associated Gene:

Gene:

PPP6R2

Ensembl Gene ID:

ENSAPLG00000003046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048408

381682 - 447727

66046

ENSAPLT00000003179

381682 - 447727

66046