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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42439045_42441470_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

42439045 - 42441470

Intron Length:

2426

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTCATTGGT

5'SS Class:

weak_major

3'SS Sequence:

TTCTATATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

CTAACCTGAAAT

Flanking Amino Acid:

GMGSKRDTGFSDTTRQRIKF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.03

1.3

43.4

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

83.1

0.74

0.8

77.6

Minor 5ss

32.1

-2

3.2

46.8

42.5

Minor BPS

57.3

0.31

1.7

72.38

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023311

42416308 - 42441540

25233