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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42482820_42483802_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42482820 - 42483802

Intron Length:

983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

ATCTGTTTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CTTTGTTTAATC

Flanking Amino Acid:

AEDKKHRPPKIAKLKESEDR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

80.3

26.9

Major BPS

81.8

0.79

1.1

34.5

Major PPT

78.4

0.64

0.8

73.3

36.5

Minor 5ss

30.6

-2.2

3.3

40.3

40.1

Minor BPS

64.7

0.44

1.8

73.34

38.7

Associated Gene:

Gene:

UBN2

Ensembl Gene ID:

ENSAPLG00000004433

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004584

42461559 - 42505866

44308