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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42566075_42600264_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42566075 - 42600264

Intron Length:

34190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CCTCCCTGACCC

Flanking Amino Acid:

SRGRKRIDTQMLSRAKPAVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

1.2

84.1

30.2

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

71.4

0.48

0.8

61.9

34.8

Minor 5ss

39.2

-1.2

2.8

46.3

Minor BPS

49.8

-0

1.8

60.44

44.6

Associated Gene:

Gene:

TTC26

Ensembl Gene ID:

ENSAPLG00000004028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004158

42519167 - 42600453

81287