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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42589506_42590611_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42589506 - 42590611

Intron Length:

1106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAACCACA

5'SS Class:

major

3'SS Sequence:

TCTTCTCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCATTTTTATTT

Flanking Amino Acid:

STAKTVDSSLMEDDFVIGYY

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.2

64.3

41.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.4

0.77

0.7

77.4

31.4

Minor 5ss

45.4

-0.5

2.6

55.6

43.5

Minor BPS

58.4

0.34

1.5

71.47

40.5

Associated Gene:

Gene:

GUCY2C

Ensembl Gene ID:

ENSAPLG00000002959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003032

42578930 - 42622331

43402