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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42601836_42603015_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42601836 - 42603015

Intron Length:

1180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAAGAAT

5'SS Class:

major

3'SS Sequence:

CCTTCCCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTAGAT

U12 Branch Point Sequence:

CTTCCCTTACAG

Flanking Amino Acid:

IEYCERGSLRDVLNDKISYP

Intron Amino Acid Position:

567

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

39.3

Major BPS

0.35

1.2

60.7

45.9

Major PPT

82.7

0.74

0.7

75.9

26.2

Minor 5ss

32.8

-2

3.3

39.7

46.1

Minor BPS

54.4

1.9

62.06

45.4

Associated Gene:

Gene:

GUCY2C

Ensembl Gene ID:

ENSAPLG00000002959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003032

42578930 - 42622331

43402