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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42603103_42607271_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42603103 - 42607271

Intron Length:

4169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTATCAATCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTATTATCAATC

Flanking Amino Acid:

KISVMYDIAKGMSYLHSSKT

Intron Amino Acid Position:

596

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

76.2

39.9

Major BPS

84.7

0.86

74.3

40.7

Major PPT

73.2

0.52

0.9

67.2

37.8

Minor 5ss

32.1

-2

3.1

40.6

45.6

Minor BPS

54.5

0.12

1.8

68.51

36.8

Associated Gene:

Gene:

GUCY2C

Ensembl Gene ID:

ENSAPLG00000002959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003032

42578930 - 42622331

43402