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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42612721_42614429_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42612721 - 42614429

Intron Length:

1709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

ACTTCCTTAAAT

Flanking Amino Acid:

LETAGEREMEVYTLVKSCWE

Intron Amino Acid Position:

716

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

73.9

32.9

Major BPS

0.5

1.1

76.9

32.8

Major PPT

81.1

0.7

82.9

32.5

Minor 5ss

44.9

-0.5

2.8

55.6

43.2

Minor BPS

79.8

1.01

1.3

87.9

Associated Gene:

Gene:

GUCY2C

Ensembl Gene ID:

ENSAPLG00000002959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003032

42578930 - 42622331

43402