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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42618181_42618511_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42618181 - 42618511

Intron Length:

331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATTAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGACTTCTAATT

Flanking Amino Acid:

HILDHHDVYKVETIGDAYMV

Intron Amino Acid Position:

864

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

74.1

36.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

81.2

0.7

0.9

75.8

38.1

Minor 5ss

30.7

-2.2

2.6

37.3

39.9

Minor BPS

0.08

1.6

67.4

37.3

Associated Gene:

Gene:

GUCY2C

Ensembl Gene ID:

ENSAPLG00000002959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003032

42578930 - 42622331

43402