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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42618687_42619628_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42618687 - 42619628

Intron Length:

942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACACAGT

5'SS Class:

major

3'SS Sequence:

ATCCCACTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTTTTTTATTC

Flanking Amino Acid:

PVWIRIGIHSGPCAAGVVGI

Intron Amino Acid Position:

922

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.1

58.9

45.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

64.4

0.32

0.8

55.2

34.7

Minor 5ss

39.5

-1.2

3.3

54.7

44.4

Minor BPS

60.4

0.31

1.6

68.82

37.9

Associated Gene:

Gene:

GUCY2C

Ensembl Gene ID:

ENSAPLG00000002959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003032

42578930 - 42622331

43402