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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42619728_42620285_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42619728 - 42620285

Intron Length:

558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGGATT

5'SS Class:

major

3'SS Sequence:

ATTTAATTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

GTCTATTTAATT

Flanking Amino Acid:

TASRMESTGLPLRIHVSGST

Intron Amino Acid Position:

955

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.4

73.4

43.3

Major BPS

90.7

1.01

0.7

19.9

Major PPT

0.63

0.9

75.1

Minor 5ss

39.1

-1.2

3.4

53.2

Minor BPS

0.58

1.5

77.31

39.6

Associated Gene:

Gene:

GUCY2C

Ensembl Gene ID:

ENSAPLG00000002959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003032

42578930 - 42622331

43402