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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42620381_42621020_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

42620381 - 42621020

Intron Length:

640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCTTT

5'SS Class:

weak_major

3'SS Sequence:

CATACCTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTTGTCATACCT

Flanking Amino Acid:

FEMRGETYLKGRGTENTYWL

Intron Amino Acid Position:

987

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

78.8

38.3

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

65.2

0.34

62.2

39.3

Minor 5ss

68.6

0.63

2.3

82.3

37.5

Minor BPS

54.1

0.21

80.09

42.1

Associated Gene:

Gene:

GUCY2C

Ensembl Gene ID:

ENSAPLG00000002959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003032

42578930 - 42622331

43402