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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42633559_42640037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42633559 - 42640037

Intron Length:

6479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTTCTACTACCT

Flanking Amino Acid:

AGFLEGYLTAPHMYDHAANM

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.3

70.1

40.6

Major BPS

71.2

0.53

70.3

31.9

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

38.9

-1.3

2.7

51.9

37.5

Minor BPS

47.1

-0.1

2.1

75.17

41.1

Associated Gene:

Gene:

PLBD1

Ensembl Gene ID:

ENSAPLG00000002764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002814

42625817 - 42662022

36206