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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42642193_42647612_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42642193 - 42647612

Intron Length:

5420

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGATTA

5'SS Class:

major

3'SS Sequence:

TCTCTTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

TCTCTCTTTCTT

Flanking Amino Acid:

LEWAKLHKQTPLSVFDVQFL

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

71.9

34.2

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

89.6

0.89

0.6

88.3

21.5

Minor 5ss

43.7

-0.7

3.1

43.4

Minor BPS

40.4

-0.6

3.5

68.38

42.9

Associated Gene:

Gene:

PLBD1

Ensembl Gene ID:

ENSAPLG00000002764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002814

42625817 - 42662022

36206