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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42647778_42648979_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42647778 - 42648979

Intron Length:

1202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCACT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

AGGGCCTGAAAC

Flanking Amino Acid:

DMGHCSALIKVLPGYENVYF

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

80.5

33.9

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

87.7

0.85

0.8

80.2

37.3

Minor 5ss

36.6

-1.5

2.9

49.5

46.5

Minor BPS

49.1

-0

1.7

56.03

41.7

Associated Gene:

Gene:

PLBD1

Ensembl Gene ID:

ENSAPLG00000002764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002814

42625817 - 42662022

36206