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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42649125_42655681_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42649125 - 42655681

Intron Length:

6557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTGATTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GTCTTGTTGATT

Flanking Amino Acid:

TGRVSFSSYPGFLVSLDDFY

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.2

31.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

64.1

0.32

1.2

41.8

Minor 5ss

39.4

-1.2

3.3

56.7

47.6

Minor BPS

50.6

0.1

2.1

70.59

41.2

Associated Gene:

Gene:

PLBD1

Ensembl Gene ID:

ENSAPLG00000002764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002814

42625817 - 42662022

36206