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Intron Name: Anas_platyrhynchos_platyrhynchos_1_426495_429177_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

426495 - 429177

Intron Length:

2683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

TGTCACTGAAGC

Flanking Amino Acid:

EEFADQDDNINAPFDRIAEI

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

86.9

22.7

Major BPS

0.3

34.1

Major PPT

91.7

0.94

0.6

87.6

22.6

Minor 5ss

45.5

-0.5

2.8

58.5

40.4

Minor BPS

48.5

-0.1

1.9

63.11

41.5

Associated Gene:

Gene:

PPP6R2

Ensembl Gene ID:

ENSAPLG00000003046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048408

381682 - 447727

66046

ENSAPLT00000003179

381682 - 447727

66046