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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42660164_42661311_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42660164 - 42661311

Intron Length:

1148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGAAAT

5'SS Class:

major

3'SS Sequence:

CATTTCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

CTCCCCGCCACA

Flanking Amino Acid:

EDMKYIMRYNNYQRDPYAEH

Intron Amino Acid Position:

454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

74.8

35.1

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

77.9

0.63

0.8

69.7

36.4

Minor 5ss

37.3

-1.4

3.1

55.2

42.8

Minor BPS

40.3

-0.7

2.4

52.44

45.6

Associated Gene:

Gene:

PLBD1

Ensembl Gene ID:

ENSAPLG00000002764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002814

42625817 - 42662022

36206