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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42670903_42671821_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42670903 - 42671821

Intron Length:

919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TTATCTTGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTGTTCTTATCT

Flanking Amino Acid:

VHHRPPQVHAEPPRPIHPAP

Intron Amino Acid Position:

1009

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

0.9

71.8

39.7

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

73.2

0.52

0.9

73.5

36.8

Minor 5ss

31.1

-2.2

2.6

35.7

40.4

Minor BPS

0.8

1.5

87.26

38.7

Associated Gene:

Gene:

ATF7IP

Ensembl Gene ID:

ENSAPLG00000002466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041408

42670287 - 42718505

48219

ENSAPLT00000002500

42670287 - 42726317

56031