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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42671935_42674860_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42671935 - 42674860

Intron Length:

2926

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGGAT

5'SS Class:

strong_major

3'SS Sequence:

GTGCTTCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TGCTTCTTACAG

Flanking Amino Acid:

NLRPVNPQTGGMTVRMPQTT

Intron Amino Acid Position:

971

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

38.2

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

79.2

0.66

0.9

72.4

37.8

Minor 5ss

29.5

-2.3

3.8

45.4

49.7

Minor BPS

50.4

-0.1

1.8

56.62

44.8

Associated Gene:

Gene:

ATF7IP

Ensembl Gene ID:

ENSAPLG00000002466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041408

42670287 - 42718505

48219

ENSAPLT00000002500

42670287 - 42726317

56031